Now showing items 1-20 of 100931

    • Quercus rubra invasion of temperate deciduous forest stands alters the structure and functions of the soil microbiome

      Stanek, Małgorzata; Kushwaha, Priyanka; Murawska-Wlodarczyk, Kamila; Stefanowicz, Anna M.; Babst-Kostecka, Alicja; Department of Environmental Science, The University of Arizona (Elsevier BV, 2023-02)
      Invasive plants can modify the diversity and taxonomical structure of soil microbiomes. However, it is difficult to generalize the underlying factors as their influence often seems to depend on the complex plant-soil-microbial interactions. In this paper, we investigated how Quercus rubra impacts on the soil microbiome across two soil horizons in relation to native woodland. Five paired adjacent invaded vs native vegetation plots in a managed forest in southern Poland were investigated. Soil microbial communities were assessed along with soil enzyme activities and soil physicochemical parameters, separately for both organic and mineral horizons, as well as forest stand characteristics to explore plant-soil-microbe interactions. Although Q. rubra did not significantly affect pH, organic C, total N, available nutrients nor enzymatic activity, differences in soil abiotic properties (except C to N ratio) were primarily driven by soil depth for both vegetation types. Further, we found significant differences in soil microbiome under invasion in relation to native vegetation. Microbial richness and diversity were lower in both horizons of Q. rubra vs control plots. Moreover, Q. rubra increased relative abundance of unique amplicon sequence variants in both horizons and thereby significantly changed the structure of the core soil microbial communities, in comparison to the control plots. In addition, predicted microbial functional groups indicated a predominant soil depth effect in both vegetation plots with higher abundance of aerobic chemoheterotrophic bacteria and endophytic fungi in the organic horizon and greater abundance of methanotrophic and methylotrophic bacteria, and ectomycorrhizal fungi in the mineral horizon. Overall, our results indicate strong associations between Q. rubra invasion and changes in soil microbiome and associated functions, a finding that needs to be further investigated to predict modifications in ecosystem functioning caused by this invasive species.
    • The Craft and Coordination of Data Curation: Complicating Workflow Views of Data Science

      Thomer, Andrea K.; Akmon, Dharma; York, Jeremy J.; Tyler, Allison R. B.; Polasek, Faye; Lafia, Sara; Hemphill, Libby; Yakel, Elizabeth; University of Arizona (Association for Computing Machinery (ACM), 2022-11-11)
      Data curation is the process of making a dataset fit-for-use and archivable. It is critical to data-intensive science because it makes complex data pipelines possible, studies reproducible, and data reusable. Yet the complexities of the hands-on, technical, and intellectual work of data curation is frequently overlooked or downplayed. Obscuring the work of data curation not only renders the labor and contributions of data curators invisible but also hides the impact that curators' work has on the later usability, reliability, and reproducibility of data. To better understand the work and impact of data curation, we conducted a close examination of data curation at a large social science data repository, the Inter-university Consortium for Political and Social Research (ICPSR). We asked: What does curatorial work entail at ICPSR, and what work is more or less visible to different stakeholders and in different contexts? And, how is that curatorial work coordinated across the organization? We triangulated accounts of data curation from interviews and records of curation in Jira tickets to develop a rich and detailed account of curatorial work. While we identified numerous curatorial actions performed by ICPSR curators, we also found that curators rely on a number of craft practices to perform their jobs. The reality of their work practices defies the rote sequence of events implied by many life cycle or workflow models. Further, we show that craft practices are needed to enact data curation best practices and standards. The craft that goes into data curation is often invisible to end users, but it is well recognized by ICPSR curators and their supervisors. Explicitly acknowledging and supporting data curators as craftspeople is important in creating sustainable and successful curatorial infrastructures.
    • Vocabulary Acquisition and Usage for Late Talkers: The Feasibility of a Caregiver-Implemented Telehealth Model

      Mettler, Heidi M.; Neiling, Sarah Lynn; Figueroa, Cecilia R.; Evans-Reitz, Nora; Alt, Mary; Department of Speech, Language, & Hearing Sciences, The University of Arizona (American Speech Language Hearing Association, 2023-01-12)
      Purpose: This feasibility study examined a caregiver-implemented telehealth model of the Vocabulary Acquisition and Usage for Late Talkers (VAULT) proto-col. We asked whether caregivers could reach fidelity on VAULT, if the protocol was socially and ecologically valid, and if late-talking toddlers could learn new words with this model. Method: Five late-talking monolingual and bilingual toddlers and four caregivers participated. The caregiver-related research questions involved measurements taken at multiple time points and replication across subjects but did not follow a specific research design. The toddler-related research questions included ele-ments of a single-case design. Caregivers completed self-paced online training modules and then provided 8 weeks of VAULT to their children with remote coaching. Fidelity data were collected during coached sessions and through rating scales. Social and ecological validity data were collected via surveys and interviews. Children’s word learning was measured before, during, and after treatment via production of targets and controls and via standardized vocabulary inventories. Results: Caregivers demonstrated high fidelity to VAULT throughout treatment. They reported being comfortable with many aspects of VAULT. Feedback was mixed regarding the time required. Many reported their child was talking more as a result of the program. Visual analysis revealed that toddlers learned more target than control words, which was corroborated by Tau-U and d effect size analyses. Conclusion: A caregiver-implemented telehealth model of VAULT was feasible, was socially and ecologically valid, and benefited toddlers, making this a worth-while model for future studies to examine.
    • Financial Instability

      Bustamante, Araceli; Chavez, Anita; Liebman, Maddy; Reynolds, Leah (The University of Arizona., 2022)
    • T-cell cellular stress and reticulocyte signatures, but not loss of naïve T lymphocytes, characterize severe COVID-19 in older adults

      Jergović, Mladen; Watanabe, Makiko; Bhat, Ruchika; Coplen, Christopher P; Sonar, Sandip A; Wong, Rachel; Castaneda, Yvonne; Davidson, Lisa; Kala, Mrinalini; Wilson, Rachel C; et al. (Springer Science and Business Media Deutschland GmbH, 2023-01-12)
      In children and younger adults up to 39 years of age, SARS-CoV-2 usually elicits mild symptoms that resemble the common cold. Disease severity increases with age starting at 30 and reaches astounding mortality rates that are ~330 fold higher in persons above 85 years of age compared to those 18–39 years old. To understand age-specific immune pathobiology of COVID-19, we have analyzed soluble mediators, cellular phenotypes, and transcriptome from over 80 COVID-19 patients of varying ages and disease severity, carefully controlling for age as a variable. We found that reticulocyte numbers and peripheral blood transcriptional signatures robustly correlated with disease severity. By contrast, decreased numbers and proportion of naïve T-cells, reported previously as a COVID-19 severity risk factor, were found to be general features of aging and not of COVID-19 severity, as they readily occurred in older participants experiencing only mild or no disease at all. Single-cell transcriptional signatures across age and severity groups showed that severe but not moderate/mild COVID-19 causes cell stress response in different T-cell populations, and some of that stress was unique to old severe participants, suggesting that in severe disease of older adults, these defenders of the organism may be disabled from performing immune protection. These findings shed new light on interactions between age and disease severity in COVID-19.
    • Non-reciprocal acoustoelectric microwave amplifiers with net gain and low noise in continuous operation

      Hackett, Lisa; Miller, Michael; Weatherred, Scott; Arterburn, Shawn; Storey, Matthew J.; Peake, Greg; Dominguez, Daniel; Finnegan, Patrick S.; Friedmann, Thomas A.; Eichenfield, Matt; et al. (Springer Science and Business Media LLC, 2023-01-16)
      Piezoelectric acoustic devices that are integrated with semiconductors can leverage the acoustoelectric effect, allowing functionalities such as gain and isolation to be achieved in the acoustic domain. This could lead to performance improvements and miniaturization of radio-frequency electronic systems. However, acoustoelectric amplifiers that offer a large acoustic gain with low power consumption and noise figure at microwave frequencies in continuous operation have not yet been developed. Here we report non-reciprocal acoustoelectric amplifiers that are based on a three-layer heterostructure consisting of an indium gallium arsenide (In0.53Ga0.47As) semiconducting film, a lithium niobate (LiNbO3) piezoelectric film, and a silicon substrate. The heterostructure can continuously generate 28.0 dB of acoustic gain (4.0 dB net radio-frequency gain) for 1 GHz phonons with an acoustic noise figure of 2.8 dB, while dissipating 40.5 mW of d.c. power. We also create a device with an acoustic gain of 37.0 dB (11.3 dB net gain) at 1 GHz with 19.6 mW of d.c. power dissipation and a non-reciprocal transmission of over 55 dB.
    • Student Feedback Regarding Online Course Production Value: A Case Study from Classics

      Stephan, Robert P.; University of Arizona, Department of Religious Studies and Classics (IEEE, 2022-09)
      This paper employs a data-driven approach to understanding the relationship between online course production quality, instructional effectiveness, and student satisfaction. To accomplish this, it assesses data from six years of student evaluations for online courses and compares it to the production style and quality present in those courses. The quantitative multiple choice course evaluation questions speak to issues of overall quality and satisfaction, student learning, and content and lesson clarity. Qualitative student comments are also assessed to understand the degree to which production quality is highlighted as a driving factor in both student enjoyment and instructional effectiveness. Finally, trends in evaluation data are analyzed in conjunction with the quality and style of each course to provide a better understanding of how students perceive the value of production quality. This project serves as an important step in furthering evidence-based online pedagogy and provides valuable insights for how to best allocate time and resources with regard to online course production.
    • The Cost of High Production Quality: A Preliminary Discussion of the Value of Production in Asynchronous Online Modalities

      Simmons, Caleb; University of Arizona, Online Education (IEEE, 2022-09)
      What would happen if online course content was produced at television-or even cinematic-level quality? Would students become more engaged? Would they learn more and more deeply? If so, would the gains be worth the expenditure of time and funds that higher video production quality requires? To put it another way: Do investments in video production quality result in measurable increases in students' achievement of learning outcomes and objectives? Questions such as these are at the heart of this preliminary discussion of production value for online content creation, which investigates a grand challenge facing higher education and society generally, as we navigate the spectrum of modalities in a post-pandemic world. This questions that this paper proposes stands at the intersection of educational scholarship, course content creation, student retention and persistence, and the achievement of learning outcomes and objectives. It, therefore, seeks to push forward a model for change and improvement in university education and teaching and learning on our campuses.
    • Job Security

      Ngomo, Kim; Dawson, Matilda; Torres, Rafael; Black, Sky (The University of Arizona., 2022)
    • Geologic Map of the Wikieup and northern half of the Greenwood Peak 7 ½’ Quadrangles, Mohave County, Arizona

      Ferguson, Charles A.; Gootee, Brian F.; Richardson, Carson A.; Thompson, Lisa A. (Arizona Geological Survey (Tucson, AZ), 2023-02)
    • Geologic Map of the Gunsight Canyon 7 ½’ quadrangle, Mohave County, Arizona

      Thompson, Lisa A.; Cook, Joseph P.; Garcia, Victor H. (Arizona Geological Survey (Tucson, AZ), 2023-02)
    • A Descriptive Study of Speech Breathing in Children With Cerebral Palsy During Two Types of Connected Speech Tasks

      Kovacs, Sydney; Darling-White, Meghan; Department of Speech, Language, and Hearing Sciences, The University of Arizona (American Speech Language Hearing Association, 2022-12-12)
      Purpose: This study examined speech breathing during two connected speech tasks in children with cerebral palsy (CP) and typically developing (TD) peers. Understanding how the respiratory system supports speech production during various speech tasks can help researchers construct appropriate models of speech production and clinicians remediate speech disorders effectively. Method: Four children with CP and four age-and sex-matched TD peers completed two speech tasks, reading and extemporaneous speech. Respiratory kinematic and acoustic data were collected. Dependent variables included utterance length, speech rate, sound pressure level, and lung volume variables. Results: Based on descriptive results, children with CP and speech motor involvement demonstrated reduced utterance length and speech rate, equivalent intensity levels, and changes in lung volume variables indicative of respiratory physiological impairment as compared to their TD peers. However, children with CP and no speech motor involvement exhibited speech production and speech breathing variables in the more typical range. In relation to task effects, the majority of children (CP and TD) produced shorter utterances, slower speech rates, equivalent intensity levels, higher lung volume initiation, termination, excursion, higher percent vital capacity per syllable, and longer inspiratory duration during extemporaneous speech as compared to reading. Conclusions: Two major themes emerged from the data: (a) Children with CP, particularly those with concomitant speech motor involvement, demonstrate different speech production and speech breathing patterns than their TD peers. (b) Speech task impacts speech production and speech breathing variables in both children with CP and their TD peers, but the extemporaneous speech task did not seem to exaggerate group differences.
    • Clinically Relevant Drug Interactions with Monoamine Oxidase Inhibitors

      Edinoff, A.N.; Swinford, C.R.; Odisho, A.S.; Burroughs, C.R.; Stark, C.W.; Raslan, W.A.; Cornett, E.M.; Kaye, A.M.; Kaye, A.D.; College of Medicine-Tucson, University of Arizona (Open Medical Publishing, 2022)
      Monoamine oxidase inhibitors (MAOI) are a class of drugs that were originally developed for the treatment of depression but have since been expanded to be used in management of affective and neurological disorders, as well as stroke and aging-related neurocognitive changes. Ranging from irreversible to reversible and selective to non-selective, these drugs target the monoamine oxidase (MAO) enzyme and prevent the oxidative deamination of various monoamines and catecholamines such as serotonin and dopamine, respectively. Tyramine is a potent releaser of norepinephrine (NE) and is found in high concentrations in foods such as aged cheeses and meats. Under normal conditions, NE is unable to accumulate to toxic levels due to the presence of MAO-A, an enzyme that degrades neurotransmitters, including NE. When MAO-A is inhibited, the capacity to handle tyramine intake from the diet is significantly reduced causing the brain to be vulnerable to overstimulation of postsynaptic adrenergic receptors with as little as 8-10 mg of tyramine ingested and can result in life-threatening blood pressure elevations. In addition to adverse reactions with certain foods, both older and newer MAOIs can negatively interact with both sympathomimetic and serotonergic drugs. In general, patients on a MAOI want to avoid two types of medications: those that can elevate blood pressure via sympathomimetic actions (e.g., phenylephrine and oxymetazoline) and those that can increase serotonin levels via 5-HT reuptake inhibition (e.g., dextromethorphan, chlorpheniramine, and brompheniramine). Illicit drugs that stimulate the central nervous system such as ecstasy (MDMA, 3,4-methylenedioxymethamphetamine) act as serotonin releasers. Patient involvement is also crucial to ensure any interaction within the healthcare setting includes making other providers aware of a MAOI prescription as well as avoiding certain OTC medications that can interact adversely with MAOIs. © 2022, Open Medical Publishing. All rights reserved.
    • A comprehensive review of intraarticular knee injection therapy, geniculate injections, and peripheral nerve stimulation for knee pain in clinical practice

      Poliwoda, S.; Noor, N.; Mousa, B.; Sarwary, Z.; Noss, B.; Urits, I.; Viswanath, O.; Behara, R.; Ulicny, K.; Howe, A.; et al. (Open Medical Publishing, 2022)
      The knee is the most common joint in adults associated with morbidity. Many pathologies are associated with knee damage, such as gout or rheumathoid arthritis, but the primary condition is osteoarthritis (OA). Not only can osteoarthritis cause significant pain, but it also can result in signficant disability as well. Treatment for this condition varies, starting off with oral analgesics and physical therapy to surgical total knee replacmenet. In the gamut of this various treatments, a conservative approach has included intra articular steroid injections. With time, researchers and clinicians determined that other components injected to the knee may additionally provide relief of this condition. In this investigation, we describe different types of knee injections such as platelet-rich plasma (PRP), hyaluronic acid, stem cells, and prolotherapy. Additionally, we describe the role of geniculate knee injections, radiofrequency, and periopheral nerve stimulation. These treatments should be considered for patients with knee pain refractory to conservative therapies. © 2022, Open Medical Publishing. All rights reserved.
    • The Value of Classical Islamic Thoufor Muslims Today

      Lucas, S.; School of Middle Eastern and North African Studies, University of Arizona (International Institute of Islamic Thought, 2020)
      This article challenges the assertion, found in the writings Dr. Taha Jabir Al-Alwani and other Muslim reformers, that Islamic thought declined precipitously in the early centuries of Islam and is of little value to contemporary Muslims. It introduces readers to the sophis-ticated thought of four diverse Muslim thinkers from the 5th/11th century who each wrote about topics that remain important to Muslims today, such as the nature of the soul, ethics, the purpose of knowledge, and spirituality. These thinkers are the philosopher-his-torian Miskawayh, the Sunni Mu‘tazili al-Ḥākim al-Jishumī, the Zahiri Ibn Ḥazm, and the Hadith scholar al-Khaṭīb al-Baghdādī. In addition to drawing specific lessons from these classical thinkers’ writings, the article encourages contemporary Muslims to emulate their practice of reading widely, including works of Muslim phi-losophy and theology, and to appreciate the significant connection they made between the acquisition of knowledge and its application to daily life. © 2020 International Institute of Islamic Though.
    • Future Directions for Digital Literacy Fluency using Cognitive Flexibility Research: A Review of Selected Digital Literacy Paradigms and Theoretical Frameworks

      Caton, A.; Bradshaw-Ward, D.; Kinshuk; Savenye, W.; University of Arizona (Commonwealth of Learning, 2022)
      As learners engage, test, and apply new subject knowledge, they often expend their cognitive capacity on the technological tools designed to capture their learning progress and outcomes. The energy and attention spent on these tools reduces their capacity to engage deeply with new learning concepts. Digital literacy skills require both cognitive and technical skills to develop a learner’s ability to locate, use, and communicate information. Increasingly complex information environments create various barriers for student learning, and as our learning and working industries continue to evolve and integrate technologies, students must overcome these barriers by bridging learning needs and technology expectations. This research explores the value of developing digital literacy to improve learners’ cognitive flexibility by decreasing technological cognitive load and increasing learning fluency. The findings highlight the need for establishing scaffolded digital literacy skills and digital tool selection, and expand college readiness requirements to include digital literacy as a prerequisite skill for learners. © 2022, Commonwealth of Learning. All rights reserved.
    • An Evaluation of Electrostatic Lofting and Subsequent Particle Motion on Bennu

      Hartzell, C.; Zimmerman, M.; Hergenrother, C.; Lunar and Planetary Laboratory, University of Arizona (Institute of Physics, 2022)
      Electrostatic lofting is the detachment of particles from a surface that occurs if the electrostatic force on the particles is greater than the forces binding the particles to the surface. Electrostatic lofting has been hypothesized to occur on the Moon and observed in the laboratory environment. Because gravity is much weaker on asteroids than on the Moon, the hypothesis of electrostatic lofting has naturally been extended to these smaller airless bodies. We evaluate the feasibility of electrostatic lofting on Bennu using two formulations of the patched charge model. We find that submillimeter particles can be lofted from Bennu’s dayside and, depending on their initial conditions, will reimpact or escape. The size and speed of the predicted electrostatically lofted particles are compared to those of the particle ejection events recently observed on Bennu. We find that dayside electrostatic lofting is not consistent with the size and speed of particles in the largest ejection events observed by the OSIRIS-REx mission. However, the escape of submillimeter particles has implications for the particle size distribution on Bennu’s surface. Additionally, we model particle charging on Bennu’s nightside due to secondary electron emission and find the resulting electrostatic force to be too weak to produce electrostatic lofting on the nightside. © 2022. The Author(s). Published by the American Astronomical Society.
    • Quality Assessment of Stereophotoclinometry as a Shape Modeling Method Using a Synthetic Asteroid

      Weirich, J.; Palmer, E.E.; Daly, M.G.; Barnouin, O.S.; Getzandanner, K.; Kidd, J.N., Jr; Adam, C.D.; Gaskell, R.; Lauretta, D.S.; Lunar and Planetary Laboratory, University of Arizona (Institute of Physics, 2022)
      The stereophotoclinometry (SPC) software suite has been used to generate global digital terrain models (DTMs) of many asteroids and moons, and was the primary tool used by the Origins, Spectral Interpretation, Resource Identification, and Security-Regolith Explorer (OSIRIS-REx) mission to model the shape of asteroid Bennu. We describe the dedicated preflight testing of SPC for the OSIRIS-REx mission using a synthetic “truth” asteroid model. SPC has metrics that determine the internal consistency of a DTM, but it was not known how these metrics are related to the absolute accuracy of a DTM, which was important for the operational needs of the mission. The absolute accuracy of an SPC-generated DTM cannot be determined without knowing the truth topography. Consequently, we developed a realistic, but synthetic, computer-generated representation of asteroid Bennu, photographed this synthetic truth model in an imaging campaign similar to that planned for the OSIRIS-REx mission, and then generated a global SPC DTM from these images. We compared the SPC DTM, which was represented by a radius every 70 cm across the asteroid surface, to the synthetic truth model to assess the absolute accuracy. We found that the internal consistency can be used to determine the 3D root-mean-square accuracy of the model to within a factor of two of the absolute accuracy. © 2022. The Author(s). Published by the American Astronomical Society.